| Ribosome complexes | 51 patterns
|
| Transmembrane helical fragments | 28 patterns
|
| Large subunit | 27 patterns
|
| I set domains | 26 patterns
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| Tyrosine-dependent oxidoreductases | 24 patterns
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| Phosphate binding protein-like | 21 patterns
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| Viruses and virus-receptor complexes | 20 patterns
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| Amylase, catalytic domain | 18 patterns
|
| G proteins | 18 patterns
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| Fibronectin type III | 17 patterns
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| alpha-Amylases, C-terminal beta-sheet domain | 17 patterns
|
| RNA polymerase | 17 patterns
|
| Short-chain scorpion toxins | 16 patterns
|
| monodomain cytochrome c | 16 patterns
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| Cold shock DNA-binding domain-like | 15 patterns
|
| Class I aminoacyl-tRNA synthetases (RS), catalytic domain | 15 patterns
|
| Nucleotide and nucleoside kinases | 15 patterns
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| C-type lectin domain | 15 patterns
|
| EGF-type module | 15 patterns
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| Spider toxins | 15 patterns
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| Classic zinc finger, C2H2 | 15 patterns
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| beta-glycanases | 14 patterns
|
| Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain | 14 patterns
|
| Pleckstrin-homology domain (PH domain) | 13 patterns
|
| Extended AAA-ATPase domain | 13 patterns
|
| Ribonuclease A-like | 13 patterns
|
| Retinol binding protein-like | 12 patterns
|
| N-acetyl transferase, NAT | 12 patterns
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| MHC antigen-recognition domain | 12 patterns
|
| Canonical RBD | 12 patterns
|
| SH2 domain | 12 patterns
|
| Snake venom toxins | 12 patterns
|
| Defensin | 12 patterns
|
| Glutathione S-transferase (GST), C-terminal domain | 11 patterns
|
| Single strand DNA-binding domain, SSB | 11 patterns
|
| Eukaryotic proteases | 11 patterns
|
| Aminoacid dehydrogenase-like, C-terminal domain | 11 patterns
|
| FAD-linked reductases, N-terminal domain | 11 patterns
|
| RecA protein-like (ATPase-domain) | 11 patterns
|
| Thioltransferase | 11 patterns
|
| Glutathione S-transferase (GST), N-terminal domain | 11 patterns
|
| Class II aminoacyl-tRNA synthetase (aaRS)-like, catalyic domain | 11 patterns
|
| beta-Lactamase/D-ala carboxypeptidase | 11 patterns
|
| Leucine zipper domain | 11 patterns
|
| Cytochrome P450 | 10 patterns
|
| Long-chain cytokines | 10 patterns
|
| Short-chain cytokines | 10 patterns
|
| Calmodulin-like | 10 patterns
|
| Class I aldolase | 10 patterns
|
| 6-phosphogluconate dehydrogenase-like, N-terminal domain | 10 patterns
|
| GABA-aminotransferase-like | 10 patterns
|
| L-arabinose binding protein-like | 10 patterns
|
| Conotoxin | 10 patterns
|
| Globins | 9 patterns
|
| Plastocyanin/azurin-like | 9 patterns
|
| TBP-associated factors, TAFs | 9 patterns
|
| Picornaviridae-like VP (VP1, VP2, VP3 and VP4) | 9 patterns
|
| SH3-domain | 9 patterns
|
| FMN-linked oxidoreductases | 9 patterns
|
| Alcohol dehydrogenase-like, C-terminal domain | 9 patterns
|
| Nitrogenase iron protein-like | 9 patterns
|
| Protein kinases, catalytic subunit | 9 patterns
|
| Proteasome subunits | 9 patterns
|
| Animal Kazal-type inhibitors | 9 patterns
|
| RING finger domain, C3HC4 | 9 patterns
|
| Tetratricopeptide repeat (TPR) | 8 patterns
|
| Di-heme elbow motif | 8 patterns
|
| Homeodomain | 8 patterns
|
| E-set domains of sugar-utilizing enzymes | 8 patterns
|
| Alcohol dehydrogenase-like, N-terminal domain | 8 patterns
|
| PDZ domain | 8 patterns
|
| Formate/glycerate dehydrogenases, NAD-domain | 8 patterns
|
| Thioltransferase 0 | 8 patterns
|
| Phosphoribosyltransferases (PRTases) | 8 patterns
|
| 2Fe-2S ferredoxin domains from multidomain proteins | 8 patterns
|
| Ankyrin repeat | 8 patterns
|
| Papain-like | 8 patterns
|
| Interleukin 8-like chemokines | 8 patterns
|
| Metallothionein | 8 patterns
|
| Peptide hormones | 8 patterns
|
| Nuclear receptor ligand-binding domain | 7 patterns
|
| Cytochrome c3-like | 7 patterns
|
| Ribonucleotide reductase-like | 7 patterns
|
| Interferons/interleukin-10 (IL-10) | 7 patterns
|
| Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 7 patterns
|
| Superantigen toxins, N-terminal domain | 7 patterns
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| Elongation factors | 7 patterns
|
| WD40-repeat | 7 patterns
|
| WW domain | 7 patterns
|
| Germine/Seed storage 7S protein | 7 patterns
|
| Type II chitinase | 7 patterns
|
| FAD/NAD-linked reductases, N-terminal and central domains | 7 patterns
|
| ABC transporter ATPase domain-like | 7 patterns
|
| Tandem AAA-ATPase domain | 7 patterns
|
| DnaQ-like 3'-5' exonuclease | 7 patterns
|
| AAT-like | 7 patterns
|
| Superantigen toxins, C-terminal domain | 7 patterns
|
| Enolase N-terminal domain-like | 7 patterns
|
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 7 patterns
|
| LDL receptor-like module | 7 patterns
|
| Long-chain scorpion toxins | 7 patterns
|
| Small Kunitz-type ihibitors & BPTI-like toxins | 7 patterns
|
| SNARE fusion complex | 7 patterns
|
| Small subunit | 7 patterns
|
| alpha-conotoxin | 7 patterns
|
| Ferritin | 6 patterns
|
| DEATH domain, DD | 6 patterns
|
| DBL homology domain (DH-domain) | 6 patterns
|
| Tombusviridae-like VP | 6 patterns
|
| Rieske iron-sulfur protein (ISP) | 6 patterns
|
| Bacterial AB5 toxins, B-subunits | 6 patterns
|
| Prokaryotic proteases | 6 patterns
|
| Multidomain cupredoxins | 6 patterns
|
| D-glucarate dehydratase-like | 6 patterns
|
| LDH N-terminal domain-like | 6 patterns
|
| Class I glutamine amidotransferases (GAT) | 6 patterns
|
| N-type ATP pyrophosphatases | 6 patterns
|
| Purine and uridine phosphorylases | 6 patterns
|
| Cystathionine synthase-like | 6 patterns
|
| Tryptophan synthase beta subunit-like PLP-dependent enzymes | 6 patterns
|
| ADP-ribosylating toxins | 6 patterns
|
| Inositol monophosphatase/fructose-1,6-bisphosphatase-like | 6 patterns
|
| Complement control module/SCR domain | 6 patterns
|
| Plant defensins | 6 patterns
|
| Zn2/Cys6 DNA-binding domain | 6 patterns
|
| Virus ectodomain | 6 patterns
|
| Recombinase DNA-binding domain | 5 patterns
|
| Retrovirus capsid protein, N-terminal core domain | 5 patterns
|
| Regulator of G-protein signalling, RGS | 5 patterns
|
| C2 set domains | 5 patterns
|
| Viral proteases | 5 patterns
|
| Pepsin-like | 5 patterns
|
| Phosphotyrosine-binding domain (PTB) | 5 patterns
|
| Fatty acid binding protein-like | 5 patterns
|
| Sialidases (neuraminidases) | 5 patterns
|
| PLC-like (P variant) | 5 patterns
|
| Biotinyl/lipoyl-carrier proteins and domains | 5 patterns
|
| Aldo-keto reductases (NADP) | 5 patterns
|
| Formate/glycerate dehydrogenases, substrate-binding domain | 5 patterns
|
| Adenylyltransferase | 5 patterns
|
| Dual specificity phosphatase-like | 5 patterns
|
| Actin/HSP70 | 5 patterns
|
| Bacterial dinuclear zinc exopeptidases | 5 patterns
|
| MurCDEF C-terminal domain | 5 patterns
|
| MurCDEF | 5 patterns
|
| ALDH-like | 5 patterns
|
| MutT-like | 5 patterns
|
| Ribonuclease Rh-like | 5 patterns
|
| GHMP Kinase, N-terminal domain | 5 patterns
|
| 2Fe-2S ferredoxin-related | 5 patterns
|
| Class II glutamine amidotransferases | 5 patterns
|
| NTF2-like | 5 patterns
|
| FKBP immunophilin/proline isomerase | 5 patterns
|
| Eukaryotic type KH-domain (KH-domain type I) | 5 patterns
|
| Ferredoxin domains from multidomain proteins | 5 patterns
|
| Dihydrodipicolinate reductase-like | 5 patterns
|
| Kringle modules | 5 patterns
|
| Bowman-Birk inhibitor, BBI | 5 patterns
|
| Plant inhibitors of proteinases and amylases | 5 patterns
|
| HIPIP (high potential iron protein) | 5 patterns
|
| Retrovirus zinc finger-like domains | 5 patterns
|
| Heat-stable enterotoxin (HSE) | 5 patterns
|